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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015886316.1_cds_XP_016440453.1_35913
CDS Infomation

[gene=LOC107766216] [db_xref=GeneID:107766216] [protein=AMSH-like ubiquitin thioesterase 3 isoform X2] [protein_id=XP_016440453.1] [location=join(189137..189247,189966..190030,190153..190228,190390..190590,190980..191074,191771..191876,191958..192004,192186..192516,192688..192777,192873..192935,193467..193541,194261..194356)] [gbkey=CDS]
Sequence

ATGAGACGGCCGGCGACTATGAACGTCGACGCGATGACTCGGAAAGTCGCCGTCGATCAT
CGAATTCCTCTCCGCAATTACTATCGAATCGCCAATAATCTCCTCCGACAGGCCAATATT
CACCGTGGGGAGAAGAATATCATAGACTTGTATATAATACTAATGAGATATTCAAGTTTG
GTTACTGAAACAATACCCGACCATCGAGACTACCTAGCTTTGCATCCAGAAGAAAGAGCA
TTATCGAAAAGGATGCTTTCAACAGTGCTAGATGAACTAGAGGGGTTAAAACCGGAATTC
CAGCGCCAGCGGAAAAGAATGGATAAAGCTCAAGCAGCAACTCAGACTTCCCAACTTAAT
AATCAAGAGAACCCTCCCTACAGATCAGTTGGAAATTCTTTAGTACGGCCCTACACCAAT
AATAAAGCATCTTCTGATTATGACAATAAATGGGCCATCAGCAATGCACCTTCATCTTTG
TGGAAGCAGAATAAAGATTACTCTGGTGTTTCATCCTCGAGTTCGATCGATATGCAGTTC
CAGAAGCTATCTCTCAATTTTCCTGTTCCAAAGCAAGAAACACTGTCAAGGCACTCGCTT
TTAGGCCCAAATGGTCTTCACGGTCAATGGTCCCGACCTAGTTCCAAGATAAAGGTGAAT
TACCCAGCAAATGCTGATTTAAGTTCAAATGAGCTTTTGAGCCTCAATCAGGTTGGTGAT
GATGGCTCGTTCGTGTCTAATGACACTGGCTTGAAGGTGGATAAGTCTCCTATGGAATCG
ATTCTTTCTTTGGATGATGGACGGTGGTTACACCCTTCTGAAGATTCTTGTTCTCCAATT
TTTGATGATATGCGGAGTGATCATATTCCTTTTAGTAACTTAAGGCAACCTTCGCCGCCT
CCAGTTCTGGCGCAAATACAACAAGAATTTCGTCCCATATCTCCATCCAAAGTTGCAGAT
CCAAGACCTGGACCAGCTAAGTCCTTTCAGGACGGGCCACCTGGTTCAAACTCTTATCAA
CATTTGCATGTTCCAGTGAGACTGATGGAAGATTTCTTAAGATTAGCTCGAGAAAATACA
GCAAAGAATTTAGAAACTTGTGCTGTTCTTGCTGGTTCACTGAGGAACCGTGTTTTTCAC
ATCACTACTCTTATTGTCCCAAAGCAGGAGTCGACTTCTGATTCTTGTTCAACATTGAAT
GAAGAAGAAATTTTTGAGGTTCAGGACAAGCTCTCTCTCTTTCCTCTTGGTTGGATACAT
GTCATTTCATGTGATATTAAAAATACGATAATAAATAATCCAGCTTGCATAGTTTTGGCC
TTCCATTTTGGTATATACTCTTGGTTTTTGGGTTAG

Peptide Sequence

PEP ID

XP_016440453.1
PEP Infomation

PREDICTED: AMSH-like ubiquitin thioesterase 3 isoform X2 [Nicotiana tabacum]
Sequence

MRRPATMNVDAMTRKVAVDHRIPLRNYYRIANNLLRQANIHRGEKNIIDLYIILMRYSSL
VTETIPDHRDYLALHPEERALSKRMLSTVLDELEGLKPEFQRQRKRMDKAQAATQTSQLN
NQENPPYRSVGNSLVRPYTNNKASSDYDNKWAISNAPSSLWKQNKDYSGVSSSSSIDMQF
QKLSLNFPVPKQETLSRHSLLGPNGLHGQWSRPSSKIKVNYPANADLSSNELLSLNQVGD
DGSFVSNDTGLKVDKSPMESILSLDDGRWLHPSEDSCSPIFDDMRSDHIPFSNLRQPSPP
PVLAQIQQEFRPISPSKVADPRPGPAKSFQDGPPGSNSYQHLHVPVRLMEDFLRLARENT
AKNLETCAVLAGSLRNRVFHITTLIVPKQESTSDSCSTLNEEEIFEVQDKLSLFPLGWIH
VISCDIKNTIINNPACIVLAFHFGIYSWFLG

Transcript Sequence

Gene sequence data has not been registered.